Basic Information
Locus ID:
BniB02g035940.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 43829874 | 43834475 | - | BniB02g035940.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 114,217.37 Da | 65.81 | 81.66 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 684 | 954 | 4.92961E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 681 | 953 | 3.8E-49 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 657 | 953 | 3.83E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 641 | 753 | 6.9E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 754 | 978 | 2.0E-59 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 678 | 956 | 38.746254 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 800 | 812 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 684 | 706 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1018 | 1032 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1045 | 1066 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 133 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1017 | 1066 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 399 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G56890.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013732240.1 | receptor-like serine/threonine-protein kinase ALE2 isoform X6 [Brassica napus] | 0 |
| Q8RWW0 | Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana OX=3702 GN=ALE2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7S8M8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_036046 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology