halophFGD

Basic Information

Locus ID: BniB02g035220.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: FBD-associated F-box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B2	43343421	43343741	+	BniB02g035220.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.77	12,631.81 Da	48.49	127.74	0.34

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00646	F-box domain	5	38	1.9E-7	IPR001810
SUPERFAMILY	SSF81383	F-box domain	2	70	2.09E-12	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	3	45	3.5E-6	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT5G50270.2	-	0
RefSeq	XP_018453564.1	PREDICTED: probable FBD-associated F-box protein At1g32375 [Raphanus sativus]	0
Swiss-Prot	Q9FGR8	Putative FBD-associated F-box protein At5g50270 OS=Arabidopsis thaliana OX=3702 GN=At5g50270 PE=4 SV=2	0
TrEMBL	A0A6J0L2A2	probable FBD-associated F-box protein At1g32375 OS=Raphanus sativus OX=3726 GN=LOC108824649 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Brassicaceae	Eutrema salsugineum	1	Thhalv10023029m.g.v1.0
Brassicaceae	Brassica nigra	1	BniB02g035220.2N