Basic Information
Locus ID:
BniB02g034610.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Small ubiquitinrelated modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 42908214 | 42908808 | + | BniB02g034610.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 11,327.83 Da | 43.50 | 78.12 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 17 | 86 | 7.4E-17 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 5 | 91 | 7.4E-21 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 91 | 2.2E-27 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 14 | 91 | 13.24954 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55856.1 | Ubiquitin-like superfamily protein. | 0 |
| RefSeq | XP_018453576.1 | PREDICTED: LOW QUALITY PROTEIN: putative small ubiquitin-related modifier 7 [Raphanus sativus] | 0 |
| B3H5R8 | Putative small ubiquitin-related modifier 8 OS=Arabidopsis thaliana OX=3702 GN=SUMO8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0L1P5 | LOW QUALITY PROTEIN: putative small ubiquitin-related modifier 7 OS=Raphanus sativus OX=3726 GN=LOC108824666 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology