Basic Information
Locus ID:
BniB02g034530.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 42878450 | 42880468 | + | BniB02g034530.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 56,172.06 Da | 39.74 | 87.93 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 28 | 262 | 1.67168E-85 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 28 | 271 | 5.9E-63 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 360 | 504 | 8.1E-28 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 340 | 506 | 2.32E-47 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 28 | 265 | 2.52E-63 | IPR013320 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 437 | 508 | 5.5E-20 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 25 | 279 | 2.8E-67 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 436 | 3.0E-28 | - |
| SMART | SM00220 | serkin_6 | 360 | 511 | 1.4E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 360 | 511 | 26.435539 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 366 | 389 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 484 | 496 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_013666904.1 | probable L-type lectin-domain containing receptor kinase S.7 [Brassica napus] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7S681 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_035942 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology