Basic Information
Locus ID:
BniB02g034130.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 42654855 | 42657729 | - | BniB02g034130.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 58,652.75 Da | 33.83 | 111.96 | 0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 25 | 442 | 6.3E-55 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 142 | 194 | 4.2E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 23 | 444 | 8.9E-76 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 81 | 92 | 1.2E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 95 | 109 | 1.2E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 150 | 160 | 1.2E-9 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 110 | 118 | 1.2E-9 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55470.1 | Na+/H+ (sodium hydrogen) exchanger 3. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_018454884.1 | PREDICTED: sodium/hydrogen exchanger 4 [Raphanus sativus] | 0 |
| Q8S397 | Sodium/hydrogen exchanger 4 OS=Arabidopsis thaliana OX=3702 GN=NHX4 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X7V141 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_035902 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology