Basic Information
Locus ID:
BniB02g032990.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
quinone reductase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 41893002 | 41899641 | + | BniB02g032990.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.07 | 38,445.35 Da | 45.16 | 72.70 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13833 | EF-hand domain pair | 51 | 103 | 1.2E-18 | IPR002048 |
| Pfam | PF03358 | NADPH-dependent FMN reductase | 169 | 296 | 3.3E-11 | IPR005025 |
| SUPERFAMILY | SSF47473 | EF-hand | 13 | 101 | 5.91E-12 | IPR011992 |
| SUPERFAMILY | SSF52218 | Flavoproteins | 161 | 352 | 1.31E-56 | IPR029039 |
| Gene3D | G3DSA:1.10.238.10 | - | 17 | 131 | 2.8E-17 | - |
| Gene3D | G3DSA:3.40.50.360 | - | 157 | 353 | 3.2E-78 | IPR029039 |
| TIGRFAM | TIGR01755 | flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV | 159 | 351 | 7.5E-68 | IPR010089 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 72 | 107 | 10.078037 | IPR002048 |
| ProSiteProfiles | PS50902 | Flavodoxin-like domain profile. | 157 | 344 | 18.519342 | IPR008254 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 85 | 97 | - | IPR018247 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54500.1 | flavodoxin-like quinone reductase 1. Encodes a flavin mononucleotide-binding flavodoxin-like quinone reductase that is a primary auxin-response gene. | 0 |
| RefSeq | XP_013608769.1 | PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1 [Brassica oleracea var. oleracea] | 0 |
| Q9LSQ5 | NAD(P)H dehydrogenase (quinone) FQR1 OS=Arabidopsis thaliana OX=3702 GN=FQR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8S2AVR8 | NAD(P)H dehydrogenase (quinone) OS=Arabidopsis arenosa OX=38785 GN=AARE701A_LOCUS18337 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology