Basic Information
Locus ID:
BniB02g032340.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
CRAL/TRIO, N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 41282314 | 41283443 | - | BniB02g032340.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.94 | 17,852.46 Da | 47.67 | 96.27 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52087 | CRAL/TRIO domain | 64 | 132 | 2.62E-5 | IPR036865 |
| Gene3D | G3DSA:3.40.525.10 | - | 30 | 145 | 2.1E-5 | IPR036865 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55840.2 | Sec14p-like phosphatidylinositol transfer family protein. | 0 |
| RefSeq | XP_018447770.1 | PREDICTED: SEC14 cytosolic factor-like [Raphanus sativus] | 0 |
| TrEMBL | A0A6J0KIQ6 | SEC14 cytosolic factor-like OS=Raphanus sativus OX=3726 GN=LOC108819267 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah025137 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000017279 |
| Apiaceae | Apium graveolens | 2 | Ag5G02704, Ag8G01154 |
| Brassicaceae | Brassica nigra | 1 | BniB02g032340.2N |
| Poaceae | Sporobolus alterniflorus | 1 | Chr15G006520 |
| Poaceae | Zea mays | 9 | Zm00001eb177610_P001, Zm00001eb186210_P001 ... |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.214 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-19746 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00003664 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-17967 |