Basic Information
Locus ID:
BniB02g031310.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Contains the following InterPro domains Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro IPR015609), Heat shock protein DnaJ, N-terminal (InterPro IPR001623), Heat shock protein DnaJ (InterPro IPR003095)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 40251155 | 40253820 | + | BniB02g031310.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 85,999.93 Da | 43.50 | 58.57 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 3.11206E-20 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 463 | 670 | 1.0E-72 | IPR024593 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 4.1E-20 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 61 | 130 | 9.16E-21 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 63 | 174 | 1.6E-21 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 2.6E-23 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 16.173429 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 2.6E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 2.6E-11 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 2.6E-11 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 699 | 717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 454 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 717 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 279 | - | - |
| Coils | Coil | Coil | 296 | 316 | - | - |
| Coils | Coil | Coil | 403 | 423 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_018467303.1 | PREDICTED: uncharacterized protein LOC108838951 [Raphanus sativus] | 0 |
| B3WEQ6 | Chaperone protein DnaJ OS=Lacticaseibacillus casei (strain BL23) OX=543734 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A8X7V1X8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_035676 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology