Basic Information
Locus ID:
BniB02g027970.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
MYND finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 36265578 | 36266817 | + | BniB02g027970.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 17,422.51 Da | 45.97 | 76.58 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81901 | HCP-like | 68 | 123 | 9.02E-5 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 62 | 143 | 1.7E-6 | IPR011990 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50450.1 | HCP-like superfamily protein with MYND-type zinc finger. | 0 |
| RefSeq | NP_199856.1 | HCP-like superfamily protein with MYND-type zinc finger [Arabidopsis thaliana] | 0 |
| Q9FK27 | F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6D2JF85 | MYND-type domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS25695 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology