Basic Information
Locus ID:
BniB02g027910.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
CPK14
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 36220409 | 36220657 | - | BniB02g027910.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 9,483.76 Da | 55.11 | 86.71 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 81 | 3.3E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 82 | 3.93E-18 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 73 | 6.0E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 82 | 12.979973 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.2 | - | 0 |
| RefSeq | XP_013592263.1 | PREDICTED: calcium-dependent protein kinase 32 [Brassica oleracea var. oleracea] | 0 |
| Q6NLQ6 | Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana OX=3702 GN=CPK32 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8S9LV01 | Protein kinase domain-containing protein (Fragment) OS=Brassica cretica OX=69181 GN=F2Q68_00045014 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah039308 |
| Apiaceae | Apium graveolens | 2 | Ag1G00989, Ag2G00231 |
| Brassicaceae | Brassica nigra | 1 | BniB02g027910.2N |
| Poaceae | Zea mays | 3 | Zm00001eb016070_P001, Zm00001eb024950_P001 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-1403, nbis-gene-38648 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-16587 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-931 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-13613, nbisL1-mrna-18710 |
| Salicaceae | Populus euphratica | 1 | populus_peu24041 |