Basic Information
Locus ID:
BniB02g026880.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Kinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 32634493 | 32636488 | + | BniB02g026880.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 41,839.56 Da | 44.67 | 85.33 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 80 | 348 | 7.11773E-117 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 76 | 347 | 3.1E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 61 | 348 | 4.37E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 63 | 157 | 2.4E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 175 | 359 | 5.0E-61 | - |
| SMART | SM00220 | serkin_6 | 74 | 348 | 5.9E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 74 | 348 | 41.120766 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 215 | 227 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 171 | 184 | 6.6E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 275 | 297 | 6.6E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 319 | 341 | 6.6E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 209 | 227 | 6.6E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 52 | - | - |
| Coils | Coil | Coil | 16 | 43 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50000.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009134038.1 | serine/threonine-protein kinase STY13 [Brassica rapa] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7S2K4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_035367 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology