halophFGD

Basic Information

Locus ID: BniB02g026720.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: F-box kelch-repeat protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B2	32089511	32090391	+	BniB02g026720.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.21	24,513.08 Da	42.19	76.14	-0.51

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF117281	Kelch motif	84	195	5.75E-8	IPR015915
Gene3D	G3DSA:2.120.10.80	-	59	199	1.2E-6	IPR015915
TIGRFAM	TIGR01640	F_box_assoc_1: F-box protein interaction domain	56	193	1.0E-14	IPR017451

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G14315.1	F-box and associated interaction domains-containing protein.	0
RefSeq	XP_009109931.1	putative F-box protein At2g02030 [Brassica rapa]	0
TrEMBL	A0A3P6BQS8	(field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA08T33842Z PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Brassicaceae	Eutrema salsugineum	1	Thhalv10009448m.g.v1.0
Brassicaceae	Brassica nigra	2	BniB02g026720.2N, BniB05g064510.2N