Basic Information
Locus ID:
BniB02g024140.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 20392076 | 20392972 | + | BniB02g024140.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.10 | 28,915.66 Da | 31.75 | 96.74 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 158 | 244 | 1.0E-13 | IPR001245 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 8 | 172 | 1.23E-20 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 128 | 248 | 1.52E-26 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 119 | 231 | 4.2E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 156 | 258 | 14.492311 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 162 | 184 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59260.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_009117047.1 | putative L-type lectin-domain containing receptor kinase II.2 [Brassica rapa] | 0 |
| Q9FIF0 | Putative L-type lectin-domain containing receptor kinase II.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK22 PE=3 SV=3 | 0 | |
| TrEMBL | A0A3P5YK61 | non-specific serine/threonine protein kinase OS=Brassica campestris OX=3711 GN=BRAA09T40956Z PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah001977 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30267630 |
| Brassicaceae | Brassica nigra | 1 | BniB02g024140.2N |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G2160 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_007504 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G400000 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2BG084160 |