Basic Information
Locus ID:
BniB02g023970.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
DNAJ heat shock N-terminal domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 20205069 | 20206715 | + | BniB02g023970.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.51 | 60,691.44 Da | 31.35 | 74.71 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 8 | 61 | 9.20563E-19 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 8 | 69 | 1.3E-19 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 315 | 521 | 1.8E-62 | IPR024593 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 4 | 73 | 1.14E-20 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 6 | 111 | 2.0E-22 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 7 | 64 | 7.5E-21 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 8 | 72 | 17.040632 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 28 | 43 | 4.0E-13 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 44 | 64 | 4.0E-13 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 64 | 83 | 4.0E-13 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 10 | 28 | 4.0E-13 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 115 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25560.1 | DNAJ heat shock N-terminal domain-containing protein. | 0 |
| RefSeq | XP_013675800.2 | uncharacterized protein LOC106380565 [Brassica napus] | 0 |
| Q8WW22 | DnaJ homolog subfamily A member 4 OS=Homo sapiens OX=9606 GN=DNAJA4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A078HEX4 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=BnaA04g14940D PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology