halophFGD

Basic Information

Locus ID: BniB02g022340.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: Ribosomal protein-like protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B2	16715821	16716817	+	BniB02g022340.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.30	38,793.60 Da	56.32	77.29	-0.52

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF04827	Plant transposon protein	147	332	3.2E-97	IPR006912

Gene Ontology

Molecular Function:

GO:0016788 (hydrolase activity, acting on ester bonds)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G13770.1
RefSeq	XP_033143953.1	putative nuclease HARBI1 isoform X1 [Brassica rapa]
TrEMBL	A0A0D3BEL7	Harbinger transposase-derived protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	2	gene_22672, gene_9527
Amaranthaceae	Atriplex hortensis	1	Ah037633
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg17534, Sbi_jg23502, Sbi_jg31094, Sbi_jg44651
Amaranthaceae	Salicornia europaea	1	Seu_jg2289
Amaranthaceae	Suaeda glauca	29	Sgl13894, Sgl14989, Sgl15286, Sgl19056, Sgl19062, Sgl20125 ... Sgl21013, Sgl23627, Sgl25509, Sgl25511, Sgl26382, Sgl30139, Sgl30675, Sgl30677, Sgl32069, Sgl33032, Sgl36107, Sgl37368, Sgl38298, Sgl39155, Sgl41408, Sgl42437, Sgl47166, Sgl52987, Sgl58263, Sgl64553, Sgl68999, Sgl80159, Sgl82588
Amaranthaceae	Chenopodium album	12	gene:ENSEOMG00000002675, gene:ENSEOMG00000003176 ... gene:ENSEOMG00000005980, gene:ENSEOMG00000006972, gene:ENSEOMG00000008354, gene:ENSEOMG00000010408, gene:ENSEOMG00000015758, gene:ENSEOMG00000023199, gene:ENSEOMG00000033073, gene:ENSEOMG00000041091, gene:ENSEOMG00000042107, gene:ENSEOMG00000045505
Amaranthaceae	Chenopodium quinoa	8	CQ.Regalona.r1.1AG0008090, CQ.Regalona.r1.1BG0011240 ... CQ.Regalona.r1.2AG0012720, CQ.Regalona.r1.3AG0010390, CQ.Regalona.r1.4AG0011230, CQ.Regalona.r1.6BG0003030, CQ.Regalona.r1.6BG0003040, CQ.Regalona.r1.8BG0004570
Asteraceae	Flaveria trinervia	45	Ftri10G00597, Ftri10G26719, Ftri12G20029, Ftri12G24906 ... Ftri13G13396, Ftri15G06995, Ftri15G13549, Ftri15G13596, Ftri15G18758, Ftri15G19836, Ftri15G24621, Ftri15G30983, Ftri15G33916, Ftri16G25592, Ftri17G00492, Ftri17G01881, Ftri17G20055, Ftri17G23311, Ftri18G28794, Ftri1G04239, Ftri1G12666, Ftri1G15710, Ftri1G24258, Ftri2G09443, Ftri3G07942, Ftri3G12909, Ftri3G21570, Ftri4G08464, Ftri4G12050, Ftri4G13649, Ftri4G26984, Ftri4G27174, Ftri5G06904, Ftri5G09626, Ftri5G12053, Ftri5G16428, Ftri5G27392, Ftri6G05440, Ftri6G19733, Ftri8G21907, Ftri9G07673, Ftri9G13518, Ftri9G26070, Ftri9G26856, Ftri9G27788
Brassicaceae	Arabidopsis thaliana	2	AT2G13770.1, AT5G35490.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10029355m.g.v1.0, Thhalv10029366m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp5g15125.v2.2, Sp5g15613.v2.2
Brassicaceae	Brassica nigra	98	BniB01g008010.2N, BniB01g008440.2N, BniB01g014430.2N ... BniB01g020060.2N, BniB01g022670.2N, BniB01g024570.2N, BniB01g024620.2N, BniB01g026100.2N, BniB01g026220.2N, BniB01g044220.2N, BniB01g044260.2N, BniB01g047360.2N, BniB01g047770.2N, BniB01g050490.2N, BniB01g055830.2N, BniB02g017170.2N, BniB02g018650.2N, BniB02g019110.2N, BniB02g022340.2N, BniB02g022720.2N, BniB02g025570.2N, BniB02g026550.2N, BniB02g029590.2N, BniB02g029990.2N, BniB02g031740.2N, BniB02g038430.2N, BniB02g041490.2N, BniB02g046700.2N, BniB02g047910.2N, BniB03g025690.2N, BniB03g027500.2N, BniB03g034090.2N, BniB03g038100.2N, BniB03g041280.2N, BniB03g041990.2N, BniB03g055910.2N, BniB04g021560.2N, BniB04g033420.2N, BniB04g035240.2N, BniB04g035320.2N, BniB04g035560.2N, BniB04g037050.2N, BniB04g038500.2N, BniB04g043260.2N, BniB04g043900.2N, BniB04g043940.2N, BniB04g058790.2N, BniB04g064300.2N, BniB05g006700.2N, BniB05g035250.2N, BniB05g036260.2N, BniB05g037790.2N, BniB05g043180.2N, BniB05g047170.2N, BniB05g058670.2N, BniB05g063580.2N, BniB05g063750.2N, BniB05g063800.2N, BniB05g063970.2N, BniB05g066560.2N, BniB05g070310.2N, BniB05g071580.2N, BniB05g072240.2N, BniB05g074950.2N, BniB05g075650.2N, BniB06g006050.2N, BniB06g016120.2N, BniB06g016130.2N, BniB06g017240.2N, BniB06g022480.2N, BniB06g026720.2N, BniB06g042710.2N, BniB06g043520.2N, BniB06g044450.2N, BniB06g045710.2N, BniB06g050480.2N, BniB06g051560.2N, BniB06g055620.2N, BniB07g010830.2N, BniB07g012350.2N, BniB07g015730.2N, BniB07g018300.2N, BniB07g031320.2N, BniB07g032920.2N, BniB07g037740.2N, BniB07g040430.2N, BniB08g016110.2N, BniB08g022060.2N, BniB08g023670.2N, BniB08g023680.2N, BniB08g030860.2N, BniB08g034340.2N, BniB08g041230.2N, BniB08g042970.2N, BniB08g045480.2N, BniB08g058160.2N, BniB08g064680.2N, BniB08g076190.2N
Plantaginaceae	Plantago ovata	13	Pov_00001907, Pov_00004169, Pov_00007489, Pov_00009824 ... Pov_00010762, Pov_00011271, Pov_00015903, Pov_00017312, Pov_00019033, Pov_00030062, Pov_00036712, Pov_00038159, Pov_00038367
Plumbaginaceae	Limonium bicolor	1	Lb4G24791
Poaceae	Echinochloa crus-galli	58	AH01.2602, AH01.4600, AH01.4847, AH02.2871, AH02.853 ... AH03.1029, AH03.1341, AH03.2886, AH03.3034, AH03.576, AH04.836, AH05.1484, AH05.3125, AH06.1317, AH06.2004, AH06.2521, AH07.1745, AH07.2490, AH07.531, AH09.994, BH01.4568, BH01.4688, BH02.1260, BH03.1207, BH03.1277, BH03.1649, BH03.3471, BH04.372, BH04.603, BH04.632, BH04.634, BH04.636, BH06.1505, BH07.1482, BH07.769, CH01.1672, CH01.3094, CH01.3095, CH01.3310, CH01.4406, CH01.5265, CH02.2737, CH03.1346, CH03.4193, CH04.1660, CH04.2655, CH04.317, CH05.2854, CH06.246, CH07.1304, CH07.1874, CH07.2572, CH07.2694, CH08.1650, CH08.851, CH09.2888, CH09.514, CH09.642
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_4BG0334010, gene-QOZ80_6BG0474060
Poaceae	Lolium multiflorum	101	gene-QYE76_000413, gene-QYE76_000879, gene-QYE76_001451 ... gene-QYE76_001908, gene-QYE76_001978, gene-QYE76_002828, gene-QYE76_003038, gene-QYE76_004261, gene-QYE76_005393, gene-QYE76_005754, gene-QYE76_005769, gene-QYE76_007366, gene-QYE76_007561, gene-QYE76_007994, gene-QYE76_011931, gene-QYE76_012252, gene-QYE76_014179, gene-QYE76_014293, gene-QYE76_014663, gene-QYE76_015072, gene-QYE76_015444, gene-QYE76_016552, gene-QYE76_017276, gene-QYE76_018223, gene-QYE76_018224, gene-QYE76_018398, gene-QYE76_018452, gene-QYE76_020031, gene-QYE76_020423, gene-QYE76_020452, gene-QYE76_020860, gene-QYE76_021343, gene-QYE76_021487, gene-QYE76_022163, gene-QYE76_022400, gene-QYE76_022859, gene-QYE76_023688, gene-QYE76_023974, gene-QYE76_024080, gene-QYE76_025308, gene-QYE76_026450, gene-QYE76_029569, gene-QYE76_030187, gene-QYE76_031972, gene-QYE76_031988, gene-QYE76_032040, gene-QYE76_033113, gene-QYE76_033989, gene-QYE76_035160, gene-QYE76_036159, gene-QYE76_036178, gene-QYE76_037147, gene-QYE76_040576, gene-QYE76_041792, gene-QYE76_041972, gene-QYE76_042790, gene-QYE76_042999, gene-QYE76_043745, gene-QYE76_044222, gene-QYE76_044471, gene-QYE76_045419, gene-QYE76_046190, gene-QYE76_048237, gene-QYE76_048430, gene-QYE76_048777, gene-QYE76_049240, gene-QYE76_049433, gene-QYE76_050170, gene-QYE76_051460, gene-QYE76_051951, gene-QYE76_052337, gene-QYE76_053627, gene-QYE76_053863, gene-QYE76_054104, gene-QYE76_054245, gene-QYE76_054458, gene-QYE76_054892, gene-QYE76_057494, gene-QYE76_058073, gene-QYE76_058659, gene-QYE76_059024, gene-QYE76_061824, gene-QYE76_062602, gene-QYE76_063035, gene-QYE76_063150, gene-QYE76_063167, gene-QYE76_063676, gene-QYE76_063966, gene-QYE76_064840, gene-QYE76_066163, gene-QYE76_066316, gene-QYE76_066368, gene-QYE76_066688, gene-QYE76_067064, gene-QYE76_068747, gene-QYE76_068816, gene-QYE76_070419, gene-QYE76_070547, gene-QYE76_070986, gene-QYE76_071436, gene-QYE76_071835
Poaceae	Oryza coarctata	3	Oco01G005280, Oco09G008270, Oco12G013990
Poaceae	Oryza sativa	1	LOC_Os05g09290.1
Poaceae	Paspalum vaginatum	6	gene-BS78_01G135400, gene-BS78_02G191200, gene-BS78_K124400 ... gene-BS78_03G390500, gene-BS78_05G079900, gene-BS78_10G170100
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0405064, Pt_Chr0500813, Pt_Chr0603908
Poaceae	Sporobolus alterniflorus	32	Chr01G011930, Chr01G038250, Chr02G023250, Chr03G007700 ... Chr03G019430, Chr04G008500, Chr04G016780, Chr04G026600, Chr06G008770, Chr06G025090, Chr06G032360, Chr08G010290, Chr10G002020, Chr10G002930, Chr10G002940, Chr10G006850, Chr10G006860, Chr10G008930, Chr10G010930, Chr12G028820, Chr13G011540, Chr13G015040, Chr13G016860, Chr13G017920, Chr13G017930, Chr15G015930, Chr17G012510, Chr19G010460, Chr22G015900, Chr23G013570, Chr24G010790, Chr31G003480
Poaceae	Thinopyrum elongatum	4	Tel1E01G721200, Telscf39201G000300, Telscf39201G000400 ... Telscf55501G000100
Poaceae	Triticum dicoccoides	33	gene_TRIDC1AG020000, gene_TRIDC1AG031370 ... gene_TRIDC1BG064730, gene_TRIDC2AG004760, gene_TRIDC2AG011880, gene_TRIDC2AG032600, gene_TRIDC2BG060390, gene_TRIDC2BG072730, gene_TRIDC2BG082990, gene_TRIDC3AG031740, gene_TRIDC3AG060520, gene_TRIDC3BG017410, gene_TRIDC3BG041950, gene_TRIDC3BG071650, gene_TRIDC4AG035430, gene_TRIDC4AG048400, gene_TRIDC4BG000810, gene_TRIDC4BG028600, gene_TRIDC4BG031700, gene_TRIDC5AG013060, gene_TRIDC5AG066570, gene_TRIDC5BG040310, gene_TRIDC5BG053650, gene_TRIDC5BG064590, gene_TRIDC5BG077900, gene_TRIDC6AG033530, gene_TRIDC6AG039440, gene_TRIDC6AG039750, gene_TRIDC6AG057070, gene_TRIDC7AG031000, gene_TRIDC7AG038330, gene_TRIDC7BG008290, gene_TRIDC7BG074110
Poaceae	Zea mays	1	Zm00001eb412390_P001
Poaceae	Zoysia japonica	1	nbis-gene-41975
Poaceae	Zoysia macrostachya	1	Zma_g3435
Portulacaceae	Portulaca oleracea	2	evm.TU.LG02.2559, evm.TU.LG15.42
Solanaceae	Lycium barbarum	13	gene-LOC132606769, gene-LOC132608125, gene-LOC132609208 ... gene-LOC132613242, gene-LOC132619574, gene-LOC132624563, gene-LOC132631128, gene-LOC132631219, gene-LOC132634159, gene-LOC132636734, gene-LOC132639600, gene-LOC132644548, gene-LOC132644551
Solanaceae	Solanum chilense	3	SOLCI001542700, SOLCI004498500, SOLCI006849400
Tamaricaceae	Reaumuria soongarica	1	STRG.10526_chr07_+
Tamaricaceae	Tamarix chinensis	1	TC02G2363