Basic Information
Locus ID:
BniB02g022290.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 16681771 | 16684806 | - | BniB02g022290.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.13 | 88,038.96 Da | 59.18 | 80.86 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 21 | 165 | 7.66681E-65 | - |
| Pfam | PF00582 | Universal stress protein family | 22 | 139 | 4.8E-9 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 486 | 742 | 1.2E-38 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 22 | 139 | 5.02E-10 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 467 | 744 | 8.09E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 463 | 557 | 5.8E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 558 | 764 | 1.8E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 21 | 152 | 4.1E-12 | IPR014729 |
| SMART | SM00220 | serkin_6 | 485 | 748 | 1.9E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 485 | 748 | 35.594372 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 603 | 615 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 763 | 793 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 250 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 185 | 264 | - | - |
| Coils | Coil | Coil | 377 | 440 | - | - |
| Coils | Coil | Coil | 351 | 371 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_018438027.1 | PREDICTED: U-box domain-containing protein 35-like [Raphanus sativus] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A397Y2S5 | Protein kinase domain-containing protein OS=Brassica campestris OX=3711 GN=BRARA_I04479 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology