Basic Information
Locus ID:
BniB02g021680.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
intracellular distribution of mitochondria
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 15991453 | 15995507 | - | BniB02g021680.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.69 | 25,996.86 Da | 45.63 | 89.66 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 106 | 171 | 1.3E-12 | IPR000719 |
| Pfam | PF00225 | Kinesin motor domain | 8 | 53 | 4.7E-8 | IPR001752 |
| Pfam | PF15044 | Mitochondrial function, CLU-N-term | 53 | 91 | 1.6E-5 | IPR028275 |
| SUPERFAMILY | SSF90096 | Subunits of heterodimeric actin filament capping protein Capz | 178 | 230 | 2.22E-7 | IPR037282 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 5 | 53 | 3.24E-9 | IPR027417 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 105 | 174 | 1.29E-20 | IPR011009 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 3 | 85 | 9.5E-11 | IPR036961 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 100 | 181 | 6.5E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 233 | 14.040023 | IPR000719 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 1 | 53 | 10.927618 | IPR001752 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 119 | 131 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01820.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_018440338.1 | PREDICTED: receptor-like kinase TMK3 [Raphanus sativus] | 0 |
| Q9SIT1 | Receptor-like kinase TMK3 OS=Arabidopsis thaliana OX=3702 GN=TMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VJQ2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_024177 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology