Basic Information
Locus ID:
BniB02g016140.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 10139211 | 10141951 | - | BniB02g016140.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 64,474.29 Da | 44.38 | 67.53 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 122 | 482 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 437 | 481 | 4.9E-5 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 126 | 418 | 7.9E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 97 | 471 | 1.01E-86 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 207 | 436 | 2.8E-109 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 121 | 447 | 2.8E-109 | - |
| SMART | SM00220 | serkin_6 | 123 | 418 | 3.3E-104 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 419 | 483 | 1.6E-4 | IPR000961 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 419 | 491 | 13.910051 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 123 | 418 | 47.862682 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 242 | 254 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 129 | 152 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 514 | 531 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G20470.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_013605582.1 | PREDICTED: serine/threonine-protein kinase tricorner-like isoform X1 [Brassica oleracea var. oleracea] | 0 |
| Q15208 | Serine/threonine-protein kinase 38 OS=Homo sapiens OX=9606 GN=STK38 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7S2N8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_034908 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology