Basic Information
Locus ID:
BniB02g011480.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
SERK5
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 6659242 | 6662273 | - | BniB02g011480.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 68,393.33 Da | 45.76 | 97.17 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 288 | 565 | 5.6E-43 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 63 | 3.1E-11 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 24 | 200 | 1.93E-35 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 266 | 569 | 2.05E-73 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 364 | 588 | 1.0E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 256 | 363 | 9.1E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 201 | 3.5E-55 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 287 | 573 | 35.19862 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 293 | 315 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 217 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G13790.1 | somatic embryogenesis receptor-like kinase 4. | 0 |
| RefSeq | XP_013630424.1 | PREDICTED: somatic embryogenesis receptor kinase 4-like isoform X1 [Brassica oleracea var. oleracea] | 0 |
| Q9SKG5 | Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=SERK4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7S1I8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_034544 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology