Basic Information
Locus ID:
BniB02g011150.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Calmodulin-binding receptor-like cytoplasmic kinase 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 6411201 | 6413756 | + | BniB02g011150.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 57,233.65 Da | 46.69 | 82.52 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 226 | 488 | 4.14102E-90 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 224 | 492 | 7.2E-52 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 200 | 494 | 5.26E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 184 | 296 | 1.8E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 297 | 507 | 8.0E-59 | - |
| SMART | SM00220 | serkin_6 | 220 | 494 | 2.1E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 220 | 494 | 38.746254 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 341 | 353 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 226 | 252 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 191 | - | - |
| Coils | Coil | Coil | 101 | 121 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G11520.1 | calmodulin-binding receptor-like cytoplasmic kinase 3. high overall homology to CRCK1 | 0 |
| RefSeq | XP_009136193.1 | calmodulin-binding receptor-like cytoplasmic kinase 3 [Brassica rapa] | 0 |
| Q9ASQ5 | Calmodulin-binding receptor-like cytoplasmic kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRCK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7S3D8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_034517 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology