Basic Information
Locus ID:
BniB02g009430.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 5237420 | 5239201 | - | BniB02g009430.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 32,325.13 Da | 59.81 | 82.26 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 7 | 145 | 5.43274E-75 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 8 | 144 | 1.4E-51 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 1 | 154 | 6.56E-62 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 1 | 148 | 4.6E-66 | IPR016135 |
| SMART | SM00212 | ubc_7 | 7 | 150 | 7.7E-67 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 4 | 150 | 59.43882 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 77 | 92 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 243 | 274 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G14400.1 | ubiquitin carrier protein 1. ubiquitin carrier protein | 0 |
| RefSeq | XP_020868927.1 | ubiquitin-conjugating enzyme E2 1 [Arabidopsis lyrata subsp. lyrata] | 0 |
| P25865 | Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana OX=3702 GN=UBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7S0U5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_034392 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology