Basic Information
Locus ID:
BniB02g008880.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
WRKY4
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 4945712 | 4947791 | + | BniB02g008880.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 51,408.36 Da | 60.97 | 53.66 | -0.85 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 371 | 428 | 3.0E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 207 | 263 | 1.9E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 205 | 265 | 2.35E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 362 | 430 | 8.63E-30 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 355 | 431 | 3.0E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 191 | 266 | 2.2E-29 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 370 | 429 | 3.2E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 206 | 264 | 6.6E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 365 | 430 | 38.319656 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 207 | 265 | 24.856667 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 339 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 352 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 201 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_018433071.1 | PREDICTED: probable WRKY transcription factor 4 isoform X1 [Raphanus sativus] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7S178 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_034349 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology