Basic Information
Locus ID:
BniB02g005730.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Copine
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 2958537 | 2959964 | + | BniB02g005730.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 23,027.83 Da | 38.43 | 97.90 | -0.03 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67800.5 | - | 0 |
| RefSeq | XP_028233041.1 | E3 ubiquitin-protein ligase RGLG2-like isoform X4 [Glycine soja] | 0 |
| Q8LB88 | E3 ubiquitin-protein ligase RGLG5 OS=Arabidopsis thaliana OX=3702 GN=RGLG5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7V3N3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_037374 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.3AG0019220 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30181380 |
| Apiaceae | Apium graveolens | 1 | Ag1G01708 |
| Brassicaceae | Brassica nigra | 1 | BniB02g005730.2N |
| Poaceae | Echinochloa crus-galli | 5 | BH05.1082, BH05.3381, BH06.1739, BH08.1774, BH08.2339 |
| Poaceae | Zea mays | 1 | Zm00001eb354350_P001 |