Basic Information
Locus ID:
BniB02g000430.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B2 | 268287 | 270299 | - | BniB02g000430.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 51,661.48 Da | 38.03 | 92.42 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 157 | 423 | 3.18891E-105 | - |
| Pfam | PF00069 | Protein kinase domain | 154 | 420 | 1.0E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 126 | 423 | 6.61E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 227 | 439 | 1.3E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 132 | 226 | 5.8E-33 | - |
| SMART | SM00220 | serkin_6 | 151 | 429 | 1.1E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 151 | 429 | 38.364635 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 273 | 285 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 157 | 179 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 104 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 101 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 445 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018440446.1 | PREDICTED: probable serine/threonine-protein kinase At1g01540 [Raphanus sativus] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7Q0S4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_079824 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology