Basic Information
Locus ID:
BniB01g060650.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 56940311 | 56942567 | + | BniB01g060650.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 53,677.78 Da | 45.30 | 75.12 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 138 | 415 | 3.10675E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 136 | 412 | 7.6E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 118 | 429 | 4.51E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 91 | 217 | 1.4E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 218 | 431 | 2.5E-61 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 132 | 418 | 38.364635 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 261 | 273 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 138 | 170 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 62 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 484 | - | - |
| Coils | Coil | Coil | 8 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01300.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009147414.1 | receptor-like serine/threonine-protein kinase At3g01300 isoform X1 [Brassica rapa] | 0 |
| Q9SRH7 | Serine/threonine-protein kinase PBL35 OS=Arabidopsis thaliana OX=3702 GN=PBL35 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7UCB3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_067944 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology