Basic Information
Locus ID:
BniB01g060460.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 56850131 | 56852137 | + | BniB01g060460.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 45,646.48 Da | 43.59 | 74.78 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 111 | 379 | 1.5006E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 107 | 378 | 3.5E-62 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 91 | 380 | 4.92E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 94 | 188 | 5.3E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 205 | 391 | 1.5E-60 | - |
| SMART | SM00220 | serkin_6 | 105 | 382 | 1.8E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 105 | 382 | 41.770931 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 246 | 258 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 202 | 215 | 2.1E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 350 | 372 | 2.1E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 240 | 258 | 2.1E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 306 | 328 | 2.1E-15 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01490.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013586418.1 | PREDICTED: serine/threonine-protein kinase HT1 [Brassica oleracea var. oleracea] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3P6FEH5 | Protein kinase domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC5T35153H PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology