Basic Information
Locus ID:
BniB01g059720.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
and MATH
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 56455204 | 56455880 | + | BniB01g059720.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 14,935.89 Da | 37.48 | 88.55 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 60 | 123 | 1.7E-15 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 59 | 125 | 1.65E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 43 | 129 | 1.4E-18 | IPR011333 |
| SMART | SM00225 | BTB_4 | 66 | 130 | 5.9E-4 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 66 | 124 | 14.232262 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03740.1 | BTB-POZ and MATH domain 4. | 0 |
| RefSeq | XP_002884409.1 | BTB/POZ and MATH domain-containing protein 4 [Arabidopsis lyrata subsp. lyrata] | 0 |
| Q9SRV1 | BTB/POZ and MATH domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=BPM4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A178V9U9 | BPM4 OS=Arabidopsis thaliana OX=3702 GN=At3g03740 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB01g059720.2N |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G981800, Tel4E01G649400, Tel7E01G261400 |