Basic Information
Locus ID:
BniB01g058510.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
NHX1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 55836821 | 55839978 | + | BniB01g058510.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.05 | 60,296.77 Da | 38.80 | 105.01 | 0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 27 | 441 | 7.3E-57 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 144 | 195 | 2.4E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 24 | 454 | 6.0E-76 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 151 | 161 | 3.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 96 | 110 | 3.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 82 | 93 | 3.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 111 | 119 | 3.1E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_018492404.1 | PREDICTED: sodium/hydrogen exchanger 2 [Raphanus sativus] | 0 |
| Q56XP4 | Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=NHX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A397ZMA4 | Sodium/hydrogen exchanger OS=Brassica campestris OX=3711 GN=BRAA05T22998Z PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology