Basic Information
Locus ID:
BniB01g057310.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 55297787 | 55300779 | + | BniB01g057310.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.31 | 61,730.28 Da | 38.15 | 110.56 | 0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 34 | 446 | 8.5E-62 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 146 | 198 | 4.8E-15 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 29 | 454 | 3.0E-75 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 85 | 96 | 6.5E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 99 | 113 | 6.5E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 114 | 122 | 6.5E-12 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 154 | 164 | 6.5E-12 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06370.3 | - | 0 |
| RefSeq | XP_018486295.1 | PREDICTED: sodium/hydrogen exchanger 3 [Raphanus sativus] | 0 |
| Q84WG1 | Sodium/hydrogen exchanger 3 OS=Arabidopsis thaliana OX=3702 GN=NHX3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7QR81 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_067505 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology