Basic Information
Locus ID:
BniB01g057050.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
kinase) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 55142071 | 55146372 | + | BniB01g057050.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 84,643.24 Da | 49.11 | 71.10 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 490 | 736 | 8.59585E-132 | - |
| CDD | cd00130 | PAS | 124 | 214 | 2.82761E-13 | IPR000014 |
| Pfam | PF00989 | PAS fold | 108 | 214 | 6.7E-12 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 484 | 736 | 3.1E-68 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 466 | 735 | 1.89E-84 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 111 | 214 | 1.59E-21 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 562 | 758 | 6.8E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 477 | 561 | 1.2E-31 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 117 | 222 | 5.6E-26 | - |
| SMART | SM00220 | serkin_6 | 484 | 744 | 2.0E-56 | IPR000719 |
| SMART | SM00091 | pas_2 | 107 | 173 | 5.6E-7 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 107 | 214 | 1.6E-13 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 105 | 176 | 14.288205 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 484 | 739 | 42.081879 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 603 | 615 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 558 | 571 | 3.7E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 663 | 685 | 3.7E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 707 | 729 | 3.7E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 597 | 615 | 3.7E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 644 | 654 | 3.7E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 302 | - | - |
| Coils | Coil | Coil | 6 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06620.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_013750657.2 | serine/threonine-protein kinase STY8 [Brassica napus] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A816UJ19 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_A05P41420.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology