Basic Information
Locus ID:
BniB01g057040.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
kinase) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 55135364 | 55140037 | + | BniB01g057040.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 78,249.34 Da | 45.69 | 73.54 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 431 | 677 | 1.41516E-133 | - |
| CDD | cd00130 | PAS | 93 | 191 | 7.74386E-12 | IPR000014 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 427 | 677 | 1.6E-68 | IPR001245 |
| Pfam | PF00989 | PAS fold | 85 | 189 | 4.1E-11 | IPR013767 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 88 | 191 | 9.07E-20 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 411 | 676 | 5.59E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 418 | 502 | 2.7E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 503 | 694 | 5.3E-64 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 93 | 196 | 5.6E-23 | - |
| SMART | SM00091 | pas_2 | 84 | 151 | 8.5E-7 | IPR000014 |
| SMART | SM00220 | serkin_6 | 425 | 685 | 4.4E-59 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 85 | 191 | 2.3E-12 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 425 | 685 | 43.099525 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 82 | 153 | 14.996401 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 544 | 556 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 499 | 512 | 4.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 538 | 556 | 4.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 585 | 595 | 4.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 648 | 670 | 4.9E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 604 | 626 | 4.9E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 52 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 42 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06620.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_018487432.1 | PREDICTED: probable tyrosine-protein kinase DDB_G0283397 [Raphanus sativus] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0NRN8 | probable tyrosine-protein kinase DDB_G0283397 OS=Raphanus sativus OX=3726 GN=LOC108857922 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology