Basic Information
Locus ID:
BniB01g056970.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BEST Arabidopsis thaliana protein match is HRB1 (HYPERSENSITIVE TO RED AND BLUE)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 55106667 | 55108020 | - | BniB01g056970.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 25,195.84 Da | 70.01 | 70.65 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14571 | Stress-induced protein Di19, C-terminal | 129 | 227 | 8.8E-29 | IPR027935 |
| Pfam | PF05605 | Drought induced 19 protein (Di19), zinc-binding | 52 | 104 | 2.9E-19 | IPR008598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 191 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06760.1 | Drought-responsive family protein. | 0 |
| RefSeq | XP_018492487.1 | PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4-like [Raphanus sativus] | 0 |
| Q8VXU6 | Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=DI19-4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0P638 | protein DEHYDRATION-INDUCED 19 homolog 4-like OS=Raphanus sativus OX=3726 GN=LOC108862751 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology