Basic Information
Locus ID:
BniB01g055580.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 54455634 | 54457010 | - | BniB01g055580.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 49,251.44 Da | 40.88 | 83.21 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 9 | 89 | 9.65667E-25 | - |
| Pfam | PF02214 | BTB/POZ domain | 9 | 94 | 6.1E-15 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 6 | 98 | 1.18E-18 | IPR011333 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 139 | 316 | 4.21E-8 | IPR036322 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 5 | 99 | 4.5E-22 | IPR011333 |
| SMART | SM00225 | BTB_4 | 7 | 106 | 6.5E-5 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09030.1 | BTB/POZ domain-containing protein. | 0 |
| RefSeq | XP_013698404.1 | protein ENDOPLASMIC RETICULUM-ARRESTED PEN3 [Brassica napus] | 0 |
| Q9S7R7 | Protein ENDOPLASMIC RETICULUM-ARRESTED PEN3 OS=Arabidopsis thaliana OX=3702 GN=EAP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7UAP2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_067105 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology