Basic Information
Locus ID:
BniB01g055070.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 54243021 | 54244656 | - | BniB01g055070.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 47,558.77 Da | 37.79 | 79.03 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 90 | 368 | 3.12412E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 86 | 363 | 9.5E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 62 | 365 | 1.28E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 170 | 379 | 9.1E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 169 | 4.2E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 369 | 38.958263 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 90 | 118 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 404 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09830.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018489186.1 | PREDICTED: probable receptor-like protein kinase At5g47070 isoform X3 [Raphanus sativus] | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7QSR8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_067174 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology