Basic Information
Locus ID:
BniB01g052600.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 53199982 | 53201078 | - | BniB01g052600.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.27 | 21,845.89 Da | 50.21 | 75.79 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 165 | 201 | 1.16469E-14 | - |
| Pfam | PF19026 | HYPK UBA domain | 163 | 201 | 2.3E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 60 | 115 | 2.9E-22 | IPR002715 |
| Gene3D | G3DSA:2.20.70.30 | - | 66 | 119 | 2.9E-31 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 163 | 200 | 2.5E-17 | - |
| SMART | SM01407 | NAC_2 | 60 | 116 | 5.0E-26 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 57 | 122 | 17.978523 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 46 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_018490598.1 | PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 1 [Raphanus sativus] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0P3S1 | nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Raphanus sativus OX=3726 GN=LOC108861263 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology