Basic Information
Locus ID:
BniB01g052070.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
strubbelig-receptor family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 52966072 | 52969356 | - | BniB01g052070.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 75,309.94 Da | 44.31 | 83.58 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 420 | 683 | 9.0E-40 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 166 | 188 | 0.015 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 3.0E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 391 | 684 | 3.01E-68 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 239 | 2.89E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 276 | 2.8E-49 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 493 | 9.6E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 687 | 1.2E-50 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 416 | 687 | 34.506054 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 164 | 177 | 4.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 97 | 110 | 4.2E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 344 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 328 | 364 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 253 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13065.1 | STRUBBELIG-receptor family 4. | 0 |
| RefSeq | XP_013584489.1 | PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 4 [Brassica oleracea var. oleracea] | 0 |
| Q6R2K2 | Protein STRUBBELIG-RECEPTOR FAMILY 4 OS=Arabidopsis thaliana OX=3702 GN=SRF4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7SFX7 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_025489 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology