Basic Information
Locus ID:
BniB01g051820.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 52840784 | 52844050 | - | BniB01g051820.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.21 | 118,809.86 Da | 31.48 | 96.50 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 586 | 644 | 3.8E-10 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 202 | 263 | 1.5E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 75 | 3.4E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 783 | 1053 | 1.3E-44 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 104 | 117 | 1.4 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 299 | 315 | 2.0 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 319 | 669 | 4.68E-50 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 388 | 7.94E-59 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 762 | 1055 | 8.47E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 742 | 856 | 5.5E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 857 | 1076 | 2.5E-58 | - |
| Gene3D | G3DSA:3.30.1490.310 | - | 500 | 557 | 5.3E-280 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 82 | 677 | 5.3E-280 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 583 | 606 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 443 | 467 | 57.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 781 | 1059 | 6.3E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 102 | 127 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 396 | 419 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 275 | 298 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 607 | 630 | 18.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 203 | 225 | 7.65805 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 781 | 1059 | 39.325748 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 904 | 916 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 787 | 810 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1065 | 1088 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13380.1 | BRI1-like 3. Similar to BRI, brassinosteroid receptor protein. | 0 |
| RefSeq | XP_018492551.1 | PREDICTED: receptor-like protein kinase BRI1-like 3 [Raphanus sativus] | 0 |
| Q9LJF3 | Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana OX=3702 GN=BRL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0P7C3 | non-specific serine/threonine protein kinase OS=Raphanus sativus OX=3726 GN=LOC108862803 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology