Basic Information
Locus ID:
BniB01g051540.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
AT3G13670 (E 0.0) protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 52718326 | 52721782 | - | BniB01g051540.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 76,006.15 Da | 53.70 | 71.48 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 127 | 403 | 1.20685E-126 | - |
| Pfam | PF00069 | Protein kinase domain | 127 | 370 | 1.3E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 127 | 411 | 5.47E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 94 | 432 | 2.2E-79 | - |
| SMART | SM00220 | serkin_6 | 127 | 426 | 2.9E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 127 | 426 | 23.75008 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 133 | 165 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 253 | 265 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 39 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 87 | - | - |
| Coils | Coil | Coil | 69 | 89 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_013749819.1 | casein kinase 1-like protein HD16 [Brassica napus] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7SG87 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_025446 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology