Basic Information
Locus ID:
BniB01g050250.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 51943737 | 51974025 | - | BniB01g050250.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.99 | 224,125.81 Da | 31.06 | 94.59 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 618 | 885 | 8.04322E-100 | - |
| CDD | cd14066 | STKc_IRAK | 1696 | 1963 | 1.12504E-98 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 616 | 883 | 1.8E-47 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1694 | 1961 | 8.2E-47 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 349 | 530 | 7.7E-45 | IPR021720 |
| Pfam | PF11721 | Malectin domain | 1427 | 1608 | 1.4E-42 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 290 | 1.11E-46 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1672 | 1970 | 2.43E-81 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 1097 | 1364 | 6.53E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 595 | 887 | 5.26E-82 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1657 | 1765 | 1.4E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 579 | 687 | 2.2E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 688 | 894 | 9.4E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1053 | 1288 | 9.7E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 4 | 208 | 6.4E-39 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 1425 | 1611 | 6.8E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1289 | 1414 | 5.3E-16 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1766 | 1977 | 2.6E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 209 | 322 | 1.3E-15 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 347 | 536 | 7.5E-36 | - |
| SMART | SM00220 | serkin_6 | 1690 | 1961 | 9.6E-32 | IPR000719 |
| SMART | SM00220 | serkin_6 | 612 | 883 | 5.1E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 612 | 889 | 39.043068 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1690 | 1967 | 38.392902 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 734 | 746 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1812 | 1824 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14840.2 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_013587280.1 | PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 isoform X1 [Brassica oleracea var. oleracea] | 0 |
| C0LGN2 | Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana OX=3702 GN=LRR-RLK PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VQS3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_018861 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology