Basic Information
Locus ID:
BniB01g048030.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 50748312 | 50764918 | + | BniB01g048030.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 369,048.28 Da | 46.97 | 75.04 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 1388 | 1636 | 2.04903E-131 | - |
| CDD | cd01367 | KISc_KIF2_like | 179 | 510 | 3.77339E-161 | - |
| CDD | cd01853 | Toc34_like | 2677 | 2925 | 5.09077E-132 | - |
| Pfam | PF00225 | Kinesin motor domain | 2039 | 2152 | 2.5E-17 | IPR001752 |
| Pfam | PF00225 | Kinesin motor domain | 185 | 511 | 3.0E-92 | IPR001752 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 3063 | 3326 | 9.8E-122 | IPR024283 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1777 | 2040 | 4.0E-122 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 1419 | 1552 | 2.9E-24 | IPR006703 |
| Pfam | PF04548 | AIG1 family | 2708 | 2866 | 5.9E-25 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 176 | 512 | 1.52E-102 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1413 | 1563 | 2.21E-16 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 2049 | 2151 | 1.55E-13 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 2702 | 2852 | 6.37E-16 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 156 | 515 | 1.1E-109 | IPR036961 |
| Gene3D | G3DSA:3.40.50.300 | - | 1385 | 1640 | 4.5E-55 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 2674 | 2929 | 8.1E-55 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 2014 | 2167 | 1.5E-17 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 177 | 518 | 5.5E-116 | IPR001752 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 1295 | 2050 | 0.0 | IPR005690 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 2584 | 3333 | 0.0 | IPR005690 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 179 | 512 | 98.42321 | IPR001752 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 2705 | 2934 | 32.079857 | IPR006703 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 1416 | 1645 | 32.299561 | IPR006703 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 411 | 422 | - | IPR019821 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 2130 | 2141 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 412 | 430 | 1.2E-27 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 259 | 280 | 1.2E-27 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 369 | 386 | 1.2E-27 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 462 | 483 | 1.2E-27 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 151 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1314 | 1333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1310 | 1344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1673 | 1710 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2196 | 2220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2480 | 2497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 897 | 911 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 731 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1017 | 1065 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2103 | 2122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1273 | 1291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1136 | 1297 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2085 | 2122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2561 | 2580 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 614 | 679 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 511 | 531 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1047 | 1061 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2447 | 2584 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2376 | 2403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 689 | 722 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 941 | 963 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1226 | 1260 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1676 | 1695 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2603 | 2622 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 569 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2498 | 2518 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 886 | 928 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2600 | 2633 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1165 | 1208 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2087 | 2102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2959 | 2992 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2966 | 2981 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1209 | 1225 | - | - |
| Coils | Coil | Coil | 762 | 793 | - | - |
| Coils | Coil | Coil | 818 | 838 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16620.1 | translocon outer complex protein 120. component of TOC complex, plastid protein import machinery. | 0 |
| RefSeq | XP_048614754.1 | translocase of chloroplast 120, chloroplastic isoform X1 [Brassica napus] | 0 |
| Q9LUS2 | Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC120 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3CJI6 | Kinesin-like protein OS=Brassica oleracea var. oleracea OX=109376 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology