Basic Information
Locus ID:
BniB01g047390.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 50427488 | 50429251 | + | BniB01g047390.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.67 | 51,869.43 Da | 40.01 | 87.83 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 157 | 423 | 8.63368E-101 | - |
| Pfam | PF00069 | Protein kinase domain | 152 | 419 | 5.2E-49 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 133 | 432 | 1.48E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 129 | 226 | 1.7E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 227 | 439 | 1.2E-65 | - |
| SMART | SM00220 | serkin_6 | 151 | 430 | 1.2E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 151 | 430 | 38.44944 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 157 | 180 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 273 | 285 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 456 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17420.1 | glyoxysomal protein kinase 1. serine/threonine protein kinase-like protein | 0 |
| RefSeq | XP_018487317.1 | PREDICTED: probable receptor-like protein kinase At3g17420 [Raphanus sativus] | 0 |
| Q9LRP3 | Probable receptor-like protein kinase At3g17420 OS=Arabidopsis thaliana OX=3702 GN=At3g17420 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0NRD0 | probable receptor-like protein kinase At3g17420 OS=Raphanus sativus OX=3726 GN=LOC108857802 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology