Basic Information
Locus ID:
BniB01g047140.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 50322261 | 50322875 | + | BniB01g047140.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 18,042.21 Da | 23.24 | 77.72 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 59 | 156 | 4.37577E-46 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 69 | 150 | 2.6E-26 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 58 | 156 | 3.13E-33 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 58 | 158 | 6.5E-35 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 59 | 158 | 37.370445 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17675.1 | Cupredoxin superfamily protein. Encodes a Plantacyanin/Basic blue family protein | 0 |
| RefSeq | XP_013637805.1 | PREDICTED: mavicyanin [Brassica oleracea var. oleracea] | 0 |
| TrEMBL | A0A8D9DQ86 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAPAZ1V2_A05P38190.2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology