Basic Information
Locus ID:
BniB01g046940.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 50230957 | 50237132 | + | BniB01g046940.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 142,307.45 Da | 58.35 | 76.02 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 883 | 1168 | 2.45213E-168 | - |
| Pfam | PF00069 | Protein kinase domain | 877 | 1163 | 1.6E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 874 | 1205 | 1.62E-89 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 875 | 1192 | 5.4E-107 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 961 | 1181 | 5.4E-107 | - |
| SMART | SM00220 | serkin_6 | 877 | 1163 | 2.3E-102 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 877 | 1163 | 52.809582 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 1164 | 1269 | 9.902293 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 996 | 1008 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1212 | 1229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1212 | 1247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 477 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 32 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 446 | 479 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_022543663.1 | probable serine/threonine protein kinase IREH1 isoform X2 [Brassica napus] | 0 |
| F4J6F6 | Probable serine/threonine protein kinase IREH1 OS=Arabidopsis thaliana OX=3702 GN=IREH1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7SIP8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_025848 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology