Basic Information
Locus ID:
BniB01g045320.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 49357195 | 49368786 | - | BniB01g045320.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.11 | 315,089.25 Da | 51.08 | 87.61 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 202 | 533 | 2.6E-110 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 196 | 566 | 4.96E-119 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 191 | 544 | 8.2E-135 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 194 | 541 | 3.3E-162 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 196 | 533 | 119.908264 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 429 | 440 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 430 | 448 | 1.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 268 | 289 | 1.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 397 | 414 | 1.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 483 | 504 | 1.2E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 122 | 138 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2724 | 2768 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2736 | 2768 | - | - |
| Coils | Coil | Coil | 2600 | 2634 | - | - |
| Coils | Coil | Coil | 2192 | 2247 | - | - |
| Coils | Coil | Coil | 2132 | 2184 | - | - |
| Coils | Coil | Coil | 2428 | 2455 | - | - |
| Coils | Coil | Coil | 1419 | 1453 | - | - |
| Coils | Coil | Coil | 1528 | 1548 | - | - |
| Coils | Coil | Coil | 744 | 764 | - | - |
| Coils | Coil | Coil | 2364 | 2384 | - | - |
| Coils | Coil | Coil | 1284 | 1325 | - | - |
| Coils | Coil | Coil | 1563 | 1583 | - | - |
| Coils | Coil | Coil | 2704 | 2724 | - | - |
| Coils | Coil | Coil | 2035 | 2055 | - | - |
| Coils | Coil | Coil | 921 | 955 | - | - |
| Coils | Coil | Coil | 1828 | 1848 | - | - |
| Coils | Coil | Coil | 2507 | 2590 | - | - |
| Coils | Coil | Coil | 642 | 662 | - | - |
| Coils | Coil | Coil | 1034 | 1124 | - | - |
| Coils | Coil | Coil | 540 | 567 | - | - |
| Coils | Coil | Coil | 1472 | 1499 | - | - |
| Coils | Coil | Coil | 1161 | 1181 | - | - |
| Coils | Coil | Coil | 2255 | 2359 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_013749346.2 | kinesin-like protein KIN-12D [Brassica napus] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A397ZCM4 | Kinesin motor domain-containing protein OS=Brassica campestris OX=3711 GN=BRARA_E02292 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology