Basic Information
Locus ID:
BniB01g045200.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 49293793 | 49296883 | - | BniB01g045200.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.06 | 66,660.70 Da | 51.84 | 84.42 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 141 | 401 | 9.50142E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 142 | 402 | 3.9E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 135 | 422 | 1.35E-82 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 432 | 584 | 1.52E-12 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 142 | 229 | 7.5E-22 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 427 | 581 | 9.4E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 230 | 414 | 1.1E-58 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 418 | 511 | 9.4E-15 | - |
| SMART | SM00220 | serkin_6 | 140 | 402 | 2.7E-99 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 140 | 402 | 50.844959 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 264 | 276 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 146 | 172 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19100.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_048630723.1 | CDPK-related kinase 2-like [Brassica napus] | 0 |
| Q9LJL9 | CDPK-related kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7SH65 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_025965 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology