Basic Information
Locus ID:
BniB01g039780.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
HMT3
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 45174254 | 45178719 | + | BniB01g039780.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 38,046.58 Da | 49.74 | 86.83 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 26 | 333 | 2.0E-79 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 22 | 337 | 4.71E-86 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 14 | 333 | 6.0E-104 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 291 | 346 | 0.58 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 129 | 252 | 18.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 9 | 113 | 2.5E-7 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 13 | 334 | 48.09301 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22740.1 | homocysteine S-methyltransferase 3. homocysteine S-methyltransferase (HMT3) | 0 |
| RefSeq | XP_013583864.1 | PREDICTED: homocysteine S-methyltransferase 3 [Brassica oleracea var. oleracea] | 0 |
| Q8LAX0 | Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HMT3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7SHU7 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_026381 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology