Basic Information
Locus ID:
BniB01g038630.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 43846170 | 43849082 | - | BniB01g038630.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.71 | 63,719.16 Da | 45.40 | 70.51 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 120 | 487 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 124 | 423 | 7.5E-63 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 442 | 486 | 1.2E-6 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 102 | 475 | 8.9E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 93 | 205 | 1.0E-66 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 206 | 271 | 1.0E-66 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 322 | 441 | 4.7E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 442 | 452 | 4.7E-43 | - |
| SMART | SM00220 | serkin_6 | 122 | 423 | 1.1E-103 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 424 | 488 | 2.0E-4 | IPR000961 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 424 | 496 | 13.56653 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 122 | 423 | 47.382126 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 128 | 151 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 241 | 253 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 536 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 504 | 553 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 504 | 518 | - | - |
| Coils | Coil | Coil | 78 | 112 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23310.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_010512358.1 | PREDICTED: serine/threonine-protein kinase tricorner [Camelina sativa] | 0 |
| Q15208 | Serine/threonine-protein kinase 38 OS=Homo sapiens OX=9606 GN=STK38 PE=1 SV=1 | 0 | |
| TrEMBL | R0G4C3 | Serine/threonine-protein kinase tricorner-like OS=Capsella rubella OX=81985 GN=CARUB_v10013343mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology