Basic Information
Locus ID:
BniB01g032880.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
domain in TBC and LysM domain containing proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 32821327 | 32823282 | + | BniB01g032880.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 31,846.46 Da | 61.25 | 69.72 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 144 | 281 | 8.5E-31 | IPR006571 |
| SMART | SM00584 | 109ultra | 118 | 282 | 1.1E-32 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 119 | 282 | 24.658478 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 73 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 72 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05590.2 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_018485526.1 | PREDICTED: TLD domain-containing protein 2 [Raphanus sativus] | 0 |
| A8KBE0 | Oxidation resistance protein 1 OS=Xenopus tropicalis OX=8364 GN=oxr1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8X7VA24 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_026844 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology