Basic Information
Locus ID:
BniB01g031980.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
LRR receptor-like serine threonine-protein kinase RLK
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 26565474 | 26567600 | - | BniB01g031980.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 73,332.02 Da | 42.77 | 94.65 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 121 | 180 | 2.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 350 | 615 | 8.3E-31 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 69 | 2.6E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 216 | 3.27E-29 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 350 | 620 | 1.44E-46 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 141 | 234 | 1.6E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 310 | 421 | 2.4E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 140 | 8.3E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 422 | 631 | 9.2E-41 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 621 | 25.601633 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G07040.1 | Leucine-rich repeat protein kinase family protein. Pollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth. | 0 |
| RefSeq | XP_009123668.1 | LOW QUALITY PROTEIN: pollen receptor-like kinase 2 [Brassica rapa] | 0 |
| Q84JQ4 | Pollen receptor-like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=PRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7SLC7 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_026912 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology