Basic Information
Locus ID:
BniB01g027300.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B1 | 17282013 | 17283810 | + | BniB01g027300.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 56,107.12 Da | 49.80 | 72.88 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05574 | STKc_phototropin_like | 110 | 463 | 1.33299E-179 | - |
| Pfam | PF00069 | Protein kinase domain | 340 | 442 | 2.9E-22 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 112 | 260 | 9.3E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 102 | 480 | 6.49E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 338 | 459 | 3.8E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 110 | 190 | 1.7E-48 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 191 | 262 | 1.7E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 460 | 484 | 3.8E-39 | - |
| SMART | SM00220 | serkin_6 | 111 | 442 | 2.2E-86 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 111 | 442 | 44.145443 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 232 | 244 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 496 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40030.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013632352.1 | PREDICTED: serine/threonine-protein kinase D6PKL1 [Brassica oleracea var. oleracea] | 0 |
| Q9SUA3 | Serine/threonine-protein kinase D6PKL1 OS=Arabidopsis thaliana OX=3702 GN=D6PKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7SLP7 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_027407 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology